I only have the BMP circuitry on there at the moment but I think I will have enough room for the 3-band EQ based on a single op amp stage.
You could use last recovery stage (just as used for original tonestack) instead of op-amp stage..
(way far from be considered "ideal" amp but it would worth a try..)
Here's my VeeCAD layout. I really like working in VeeCAD. Nobody mentions it much but maybe there's some other Vero tool that everyone uses.

Here's my schematic in TinyCAD. The ProtoPedal board has a MOSFET reverse polarity blocker built in so I will probably add a 47R/100 uF low pass right on that prior to heading to +9V on the main board. Jacks and pots are not shown although I do have a 2-pin input.


Here's some design questions:
a) I'm not sure in advance of the P-P swing output from Q3 collector. So I'm not sure if I should pad the input going to the equalizer.
b) Similarly I'm not sure now much to pad the output of the equalizer. I can design in a couple resistors and then figure it out as I am building it.
Anyone notice anything missing? I haven't put in part values and I will have to make sure that the parts, esp. the caps will fit in the footprints. I can stand TH resistors on end which is why they fit into a variable amount of spaces, down to 2 0.1" apart.