Thanks for the link to the schematic BTW. I need to look it over and see what all the part changes I made did, with Bob's help I hope. 
Okay here goes ... I'll give you the info that I know: I'm an ear tweaker with limited knowledge, tweak 'till it sounds good

C1 - same value just a better quality metal film cap ( not sure how much better but what the hell ... )
C2 - upped from .47 to .68 to let a little more bass pass through ...
C3 - upped from .047 to .068 to let a little more bass pass through ...
C4 - not sure ... this is from the Keeley mod, beyond my electronics knowledge
C5 - same value just a better quality metal film cap
C7 - raised to cut some of the harsh top end of this opamp stage ( I think anyways ... )
C8 - raised in conjuction with lowering R13 to increase gain but maintain the same frequency response. If you lower the resistor you have to raise the cap ... ( anyone wanna verify this, I'm going from my TS knowledge and this looks to be similar. )
C9 - same value just a better quality metal film cap
C12 - effects the tone circuit but not sure how ...
C13 - upped from .047 to .1 to allow more bass to pass through ...
C14 - same value but change electrolytic to metal film for supposely less muffled sound ...
R16 - affects the mids, lowered for more ...
R39 - not sure but I'm assuming it let more signal flow through as it's a smaller resitance ( anyone ? )
Anyways ... that's about it, I may not be 100% correct but I won't be offended if someone was to correct me

I'm still learning
